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COLLECTIONS VIEW SINGLE CELL

Single Cell - Violin Plot

Violin plot view

Usage

This chart allows to compare distribution of feature measurements across groups, e.g. gene expression levels across cell clusters. It is similar to Box Plot

  • Input

    • Feature: select a feature type and name.
    • Group By: the column shown on X-axis
  • Options

    • Click Add to create additional charts and show side-by-side.
  • Getting Started
    • Quick Tour
  • DataHub
  • Views - Bulk Collection
    • CNV > CNV Distribution
    • CNV > Gene List
    • Expression > Expression Grouping
    • Expression > Expression Heatmap
    • Expression > Expression Volcano
    • Expression > Expression Waterfall
    • Methylation > Methylation Beta Values
    • Mutation > Alteration Distribution
    • Mutation > Mutated Genes
    • Mutation > Mutation Landscape
    • Sample > Data Availability
    • Sample > Sample Details
    • Sample > Sample Grouping
    • Special > Waterfall
    • Special > Correlation
    • Special > Grid Pattern
    • Special > Survival
  • Views - Single Cell Collection
    • Cell > Cell Details
    • Cell > Cell Grouping
    • Cell > Cell Grouping (Proportion)
    • Correlation
    • Dot Plot
    • Feature
    • Markers
    • Violin Plot
  • Analytics
    • Affymetrix
    • DESeq2
    • FGSEA
    • gscreend
    • Seurat
    • STACAS
  • Projects
  • Commands
    • g3tools
    • ConvertMetaData
    • ConvertData
    • LoadData
    • LoadSingleCell
    • RunAnalysis
  • Installation
    • Server Installation (AMI-Based)
    • Server Installation (Docker-Based)
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  • About
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  • Getting Started
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  • Views - Bulk Collection
  • Views - Single Cell Collection
  • Analytics
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